Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0857 | Not Available | Negative | 918339 - 918929 | 22791.2 |
| hypothetical protein | M099_0858 | Not Available | Positive | 919247 - 919372 | 4850.84 |
| ktsc domain protein | M099_0859 | Not Available | Positive | 919378 - 919530 | 5835.89 |
| hypothetical protein | M099_0860 | Not Available | Positive | 919595 - 920176 | 22794.8 |
| putative crispr-associated protein cas2 | M099_0861 | Not Available | Negative | 921187 - 921318 | 4868.01 |
| crispr-associated endonuclease cas1 | M099_0862 | Not Available | Negative | 921525 - 922457 | 34994.7 |
| virulence rhum family protein | M099_0863 | Not Available | Negative | 922484 - 923482 | 38502.0 |
| hnh endonuclease family protein | M099_0864 | Not Available | Negative | 923497 - 928026 | 176671.0 |
| voltage gated chloride channel family protein | M099_0865 | Not Available | Negative | 928211 - 929809 | 59693.1 |
| marr family protein | M099_0866 | Not Available | Negative | 929842 - 930171 | 12226.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

