Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0837 | Not Available | Negative | 892332 - 892487 | 5669.97 |
| putative outer membrane protein, probably involved in nutrient binding protein | M099_0838 | Not Available | Positive | 892627 - 893868 | 46613.2 |
| calcineurin-like phosphoesterase family protein | M099_0839 | Not Available | Positive | 893916 - 895079 | 44574.9 |
| l-serine ammonia-lyase | M099_0840 | Not Available | Positive | 895229 - 896437 | 43967.2 |
| putative periplasmic protein | M099_0841 | Not Available | Negative | 896617 - 897057 | 16654.3 |
| hypothetical protein | M099_0842 | Not Available | Negative | 897150 - 897719 | 21153.6 |
| trka-n domain protein | M099_0843 | Not Available | Negative | 897934 - 898620 | 25637.0 |
| cation transport family protein | M099_0844 | Not Available | Negative | 898623 - 900452 | 67912.0 |
| pyridoxal-phosphate dependent enzyme family protein | M099_0845 | Not Available | Positive | 900647 - 902011 | 50196.2 |
| hypothetical protein | M099_0846 | Not Available | Positive | 902629 - 904701 | 78385.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

