Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding domain protein | M099_0827 | Not Available | Negative | 881427 - 881990 | 22255.1 |
| hypothetical protein | M099_0828 | Not Available | Negative | 882199 - 882345 | 5873.43 |
| hypothetical protein | M099_0829 | Not Available | Positive | 882654 - 882953 | 11836.5 |
| bacterial ph domain protein | M099_0830 | Not Available | Positive | 883122 - 883565 | 16630.7 |
| hypothetical protein | M099_0831 | Not Available | Positive | 883685 - 883897 | 8579.56 |
| Trna-ser | Not Available | Not Available | Positive | 884289 - 884373 | Not Available |
| smr domain protein | M099_0833 | Not Available | Positive | 884522 - 887026 | 95166.6 |
| rna polymerase sigma-70 factor, expansion 1 family protein | M099_0834 | Not Available | Positive | 887106 - 887657 | 21576.8 |
| fecr family protein | M099_0835 | Not Available | Positive | 887761 - 888930 | 44559.6 |
| tonb-linked outer membrane, susc/raga family protein | M099_0836 | Not Available | Positive | 888946 - 892335 | 126869.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

