Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0807 | Not Available | Negative | 864220 - 864609 | 14601.4 |
| hypothetical protein | M099_0808 | Not Available | Positive | 864728 - 865897 | 45939.7 |
| nad binding domain of 6-phosphogluconate dehydrogenase family protein | M099_0809 | Not Available | Negative | 865894 - 866901 | 37605.3 |
| septum formation protein maf | M099_0810 | Not Available | Negative | 866968 - 867549 | 21744.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, yrbi family protein | M099_0811 | Not Available | Negative | 867567 - 868085 | 19125.2 |
| hypothetical protein | M099_0812 | Not Available | Negative | 868091 - 868897 | 29767.2 |
| putative membrane protein | M099_0813 | Not Available | Negative | 868897 - 869223 | 11882.3 |
| nitroreductase family protein | M099_0814 | Not Available | Negative | 869226 - 869723 | 18445.5 |
| acetyltransferase domain protein | M099_0815 | Not Available | Positive | 869850 - 870830 | 38348.9 |
| methylmalonyl-coa epimerase | M099_0816 | Not Available | Positive | 870987 - 871400 | 14910.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

