Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | M099_0797 | Not Available | Negative | 853485 - 854372 | 33841.0 |
| pepsy-associated tm helix family protein | M099_0798 | Not Available | Negative | 854400 - 854975 | 21635.8 |
| putative lipoprotein | M099_0799 | Not Available | Negative | 854959 - 855543 | 20951.8 |
| hypothetical protein | M099_0800 | Not Available | Negative | 855564 - 857090 | 56453.8 |
| putative lipoprotein | M099_0801 | Not Available | Negative | 857153 - 858367 | 44732.5 |
| tonb-dependent receptor plug domain protein | M099_0802 | Not Available | Negative | 858389 - 861124 | 103889.0 |
| hypothetical protein | M099_0803 | Not Available | Positive | 861579 - 861866 | 11067.8 |
| hypothetical protein | M099_0804 | Not Available | Positive | 862011 - 862328 | 12269.8 |
| ahpc/tsa family protein | M099_0805 | Not Available | Negative | 862462 - 862977 | 19525.4 |
| sugar (and other) transporter family protein | M099_0806 | Not Available | Positive | 863043 - 864218 | 42786.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

