Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine permease family protein | M099_0777 | Not Available | Positive | 829433 - 830764 | 46624.3 |
| p-loop atpase family protein | M099_0778 | Not Available | Positive | 830867 - 832297 | 55468.1 |
| moba-like ntp transferase domain protein | M099_0779 | Not Available | Positive | 832294 - 833139 | 32216.8 |
| methionine synthase | M099_0780 | Not Available | Negative | 833335 - 836088 | 100952.0 |
| ssra-binding protein | M099_0781 | Not Available | Negative | 836126 - 836578 | 17572.4 |
| hypothetical protein | M099_0782 | Not Available | Negative | 836578 - 837147 | 21095.2 |
| phage integrase family protein | M099_0783 | Not Available | Positive | 837522 - 838610 | 41848.2 |
| hypothetical protein | M099_0784 | Not Available | Positive | 839003 - 839341 | 13079.2 |
| putative lipoprotein | M099_0785 | Not Available | Positive | 839338 - 840345 | 37844.5 |
| hypothetical protein | M099_0786 | Not Available | Positive | 840389 - 841528 | 42158.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

