Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0056 | Not Available | Positive | 56393 - 56509 | 4183.12 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_0057 | Not Available | Positive | 56972 - 57472 | 19502.5 |
| hypothetical protein | M099_0058 | Not Available | Positive | 57538 - 59961 | 88567.4 |
| hypothetical protein | M099_0059 | Not Available | Positive | 60205 - 60366 | 6456.91 |
| hypothetical protein | M099_0060 | Not Available | Positive | 60563 - 61312 | 28531.6 |
| radical sam superfamily protein | M099_0061 | Not Available | Positive | 61309 - 62379 | 41120.6 |
| hypothetical protein | M099_0062 | Not Available | Positive | 62400 - 62648 | 8782.24 |
| protein araj | M099_0063 | Not Available | Positive | 62874 - 64022 | 40837.5 |
| putative transmembrane protein | M099_0064 | Not Available | Negative | 63983 - 64402 | 15775.0 |
| hypothetical protein | M099_0065 | Not Available | Positive | 64541 - 65008 | 17916.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

