Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter associated domain protein | M099_0747 | Not Available | Positive | 795031 - 796260 | 46492.5 |
| sura n-terminal domain protein | M099_0748 | Not Available | Positive | 796366 - 798498 | 78893.4 |
| tonb family c-terminal domain protein | M099_0749 | Not Available | Negative | 799129 - 800142 | 39140.0 |
| ketol-acid reductoisomerase | M099_0750 | Not Available | Negative | 800342 - 801385 | 38168.5 |
| acyl-acp thioesterase | M099_0751 | Not Available | Negative | 801420 - 802163 | 28470.1 |
| acetolactate synthase, small subunit | M099_0752 | Not Available | Negative | 802163 - 802717 | 21284.6 |
| acetolactate synthase, large subunit, biosynthetic type | M099_0753 | Not Available | Negative | 802728 - 804425 | 61841.6 |
| dihydroxy-acid dehydratase | M099_0754 | Not Available | Negative | 804525 - 806282 | 62339.0 |
| hypothetical protein | M099_0755 | Not Available | Negative | 806738 - 807112 | 14063.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase family protein | M099_0756 | Not Available | Positive | 807468 - 808046 | 21017.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

