Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferases group 1 family protein | M099_0737 | Not Available | Positive | 785601 - 786719 | 42816.1 |
| glycosyl transferase 2 family protein | M099_0738 | Not Available | Positive | 786716 - 787921 | 46029.0 |
| response regulator | M099_0739 | Not Available | Negative | 787925 - 788281 | 13485.5 |
| hypothetical protein | M099_0740 | Not Available | Negative | 788518 - 788655 | 5278.35 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_0741 | Not Available | Negative | 788714 - 789608 | 33462.5 |
| hypothetical protein | M099_0742 | Not Available | Negative | 789605 - 790780 | 45049.3 |
| pantothenate kinase, type iii family protein | M099_0743 | Not Available | Positive | 790907 - 791635 | 26911.9 |
| hypothetical protein | M099_0744 | Not Available | Positive | 791622 - 792938 | 49230.1 |
| tpr repeat family protein | M099_0745 | Not Available | Positive | 792985 - 794340 | 50268.8 |
| lipopolysaccharide-assembly, lptc-related family protein | M099_0746 | Not Available | Positive | 794415 - 794987 | 22113.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

