Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0697 | Not Available | Positive | 743898 - 744458 | 20322.0 |
| putative thiol peroxidase | M099_0698 | Not Available | Positive | 744527 - 745030 | 17976.7 |
| nad dependent epimerase/dehydratase family protein | M099_0699 | Not Available | Negative | 745225 - 746301 | 40581.7 |
| gdp-mannose 4,6-dehydratase | M099_0700 | Not Available | Negative | 746301 - 747383 | 41218.5 |
| nucleotidyl transferase family protein | M099_0701 | Not Available | Negative | 747559 - 748623 | 40506.4 |
| undecaprenyl-phosphate glucose phosphotransferase | M099_0702 | Not Available | Positive | 748736 - 750139 | 54120.9 |
| glucose-1-phosphate thymidylyltransferase | M099_0703 | Not Available | Positive | 750175 - 751062 | 32767.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | M099_0704 | Not Available | Positive | 751062 - 751631 | 21738.7 |
| chain length determinant family protein | M099_0705 | Not Available | Negative | 751807 - 752946 | 41468.8 |
| polysaccharide biosynthesis/export family protein | M099_0706 | Not Available | Negative | 752954 - 755374 | 89771.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

