Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain protein | M099_0677 | Not Available | Negative | 723335 - 724621 | 49642.2 |
| glycosyl transferase 2 family protein | M099_0678 | Not Available | Negative | 724732 - 725475 | 28095.9 |
| o-antigen ligase like membrane family protein | M099_0679 | Not Available | Negative | 725463 - 726740 | 48346.4 |
| hypothetical protein | M099_0680 | Not Available | Negative | 726963 - 727952 | 38921.0 |
| polysaccharide biosynthesis family protein | M099_0681 | Not Available | Negative | 728133 - 729506 | 51179.2 |
| hypothetical protein | M099_0682 | Not Available | Negative | 729691 - 729846 | 5783.43 |
| hypothetical protein | M099_0683 | Not Available | Negative | 729956 - 730177 | 8756.39 |
| hypothetical protein | M099_0684 | Not Available | Negative | 730286 - 731383 | 42334.1 |
| hypothetical protein | M099_0685 | Not Available | Negative | 731743 - 732117 | 14457.7 |
| nucleotidyltransferase domain protein | M099_0686 | Not Available | Negative | 732110 - 732403 | 11121.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

