Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine decarboxylase | M099_0046 | Not Available | Positive | 48399 - 50291 | 71492.0 |
| acetylglutamate kinase | M099_0047 | Not Available | Positive | 50296 - 51069 | 27207.2 |
| rna polymerase sigma factor, sigma-70 family protein | M099_0048 | Not Available | Positive | 51190 - 51642 | 17786.2 |
| hypothetical protein | M099_0049 | Not Available | Positive | 51632 - 52111 | 18339.8 |
| hypothetical protein | M099_0050 | Not Available | Negative | 52309 - 52857 | 19117.1 |
| hypothetical protein | M099_0051 | Not Available | Positive | 52877 - 53023 | 5442.23 |
| hypothetical protein | M099_0052 | Not Available | Positive | 53147 - 53851 | 27306.5 |
| prolyl oligopeptidase family protein | M099_0053 | Not Available | Positive | 53911 - 55182 | 47820.3 |
| bacterial sensory transduction regulator family protein | M099_0054 | Not Available | Positive | 55287 - 55937 | 24753.7 |
| hypothetical protein | M099_0055 | Not Available | Positive | 56109 - 56363 | 9946.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

