Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0657 | Not Available | Positive | 700523 - 700792 | 10368.6 |
| hypothetical protein | M099_0658 | Not Available | Positive | 700823 - 701731 | 34398.9 |
| putative transmembrane protein | M099_0659 | Not Available | Positive | 701736 - 702263 | 20008.9 |
| competence coia-like family protein | M099_0660 | Not Available | Negative | 702542 - 703648 | 42721.6 |
| hypothetical protein | M099_0661 | Not Available | Negative | 704138 - 705040 | 33804.1 |
| hypothetical protein | M099_0662 | Not Available | Negative | 705070 - 706293 | 47019.2 |
| helicase conserved c-terminal domain protein | M099_0663 | Not Available | Negative | 706298 - 710380 | 157589.0 |
| hypothetical protein | M099_0664 | Not Available | Negative | 710367 - 712313 | 77280.7 |
| transposase dde domain protein | M099_0665 | Not Available | Negative | 712313 - 713599 | 49642.2 |
| ftsx-like permease family protein | M099_0666 | Not Available | Positive | 713740 - 714720 | 37192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

