Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase (nadph), homotetrameric | M099_0637 | Not Available | Positive | 681477 - 683774 | 82876.6 |
| hypothetical protein | M099_0638 | Not Available | Positive | 684185 - 684955 | 29526.6 |
| hypothetical protein | M099_0639 | Not Available | Positive | 685655 - 685891 | 8972.14 |
| hypothetical protein | M099_0640 | Not Available | Positive | 686537 - 686758 | 8477.08 |
| hypothetical protein | M099_0641 | Not Available | Negative | 686931 - 687074 | 5125.26 |
| hypothetical protein | M099_0642 | Not Available | Negative | 687254 - 687385 | 4903.31 |
| pp-loop family protein | M099_0643 | Not Available | Negative | 687452 - 688207 | 29155.8 |
| tpr repeat family protein | M099_0644 | Not Available | Positive | 688351 - 689760 | 54110.7 |
| nfed-like, partner-binding family protein | M099_0645 | Not Available | Positive | 689774 - 690244 | 17112.5 |
| sigmaw regulon antibacterial family protein | M099_0646 | Not Available | Positive | 690390 - 691388 | 35992.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

