Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | M099_0627 | Not Available | Positive | 673134 - 673841 | 26402.7 |
| nlpc/p60 family protein | M099_0628 | Not Available | Positive | 673838 - 674350 | 19418.5 |
| putative haloacid dehalogenase-like hydrolase domain protein | M099_0629 | Not Available | Positive | 674406 - 676475 | 79628.2 |
| ribosomal protein l21 | M099_0630 | Not Available | Positive | 676689 - 677006 | 11743.4 |
| ribosomal protein l27 | M099_0631 | Not Available | Positive | 677028 - 677291 | 9251.19 |
| thiamine pyrophosphokinase | M099_0632 | Not Available | Negative | 677348 - 677983 | 23777.5 |
| nicotinamide mononucleotide transporter pnuc family protein | M099_0633 | Not Available | Negative | 677970 - 678542 | 22114.5 |
| serine--trna ligase | M099_0634 | Not Available | Positive | 678662 - 679936 | 47884.3 |
| hypothetical protein | M099_0635 | Not Available | Negative | 679947 - 680063 | 4429.27 |
| major facilitator superfamily protein | M099_0636 | Not Available | Positive | 680101 - 681294 | 42439.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

