Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel domain protein | M099_0617 | Not Available | Positive | 659581 - 660675 | 41245.9 |
| methyltransferase domain protein | M099_0618 | Not Available | Positive | 660731 - 661519 | 30817.0 |
| conserved hypothetical 95 family protein | M099_0619 | Not Available | Negative | 662172 - 663356 | 44475.1 |
| 3'-5' exonuclease family protein | M099_0620 | Not Available | Negative | 663346 - 663996 | 24607.5 |
| hypothetical protein | M099_0621 | Not Available | Negative | 663993 - 664556 | 21633.7 |
| ftsk/spoiiie family protein | M099_0622 | Not Available | Positive | 664661 - 667126 | 91840.0 |
| outer membrane lipocarrier lola family protein | M099_0623 | Not Available | Positive | 667143 - 667757 | 22975.4 |
| thioredoxin-disulfide reductase | M099_0624 | Not Available | Positive | 667827 - 668774 | 34005.6 |
| peptidase m16 inactive domain protein | M099_0625 | Not Available | Positive | 668805 - 671624 | 106234.0 |
| putative membrane protein | M099_0626 | Not Available | Positive | 671634 - 673121 | 57446.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

