Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrb/uvrc motif family protein | M099_0607 | Not Available | Negative | 653175 - 653741 | 21270.7 |
| nucleoside h+ symporter family protein | M099_0608 | Not Available | Negative | 653800 - 655056 | 45962.3 |
| hypothetical protein | M099_0609 | Not Available | Positive | 655090 - 655209 | 4728.74 |
| hypothetical protein | M099_0610 | Not Available | Negative | 655279 - 655893 | 22972.6 |
| hypothetical protein | M099_0611 | Not Available | Negative | 655915 - 656481 | 21072.0 |
| rna polymerase sigma factor, sigma-70 family protein | M099_0612 | Not Available | Negative | 656472 - 656942 | 18010.0 |
| aldose 1-epimerase family protein | M099_0613 | Not Available | Negative | 657129 - 658262 | 41888.4 |
| hypothetical protein | M099_0614 | Not Available | Negative | 658268 - 658411 | 5773.06 |
| hypothetical protein | M099_0615 | Not Available | Negative | 658416 - 658652 | 8285.19 |
| rna polymerase sigma factor, sigma-70 family protein | M099_0616 | Not Available | Positive | 658896 - 659423 | 20134.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

