Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | M099_0587 | Not Available | Positive | 629487 - 630638 | 43842.2 |
| rnd transporter, hydrophobe/amphiphile efflux-1 family protein | M099_0588 | Not Available | Positive | 630651 - 633800 | 115620.0 |
| efflux transporter, outer membrane factor (omf) lipo, nodt family protein | M099_0589 | Not Available | Positive | 633778 - 635235 | 54833.0 |
| transglycosylase associated family protein | M099_0590 | Not Available | Negative | 635324 - 635575 | 8688.23 |
| hypothetical protein | M099_0591 | Not Available | Negative | 635680 - 635811 | 5065.1 |
| efflux transporter, rnd family, mfp subunit | M099_0592 | Not Available | Positive | 635794 - 636840 | 38696.1 |
| export membrane family protein | M099_0593 | Not Available | Positive | 636861 - 639920 | 112972.0 |
| outer membrane efflux family protein | M099_0594 | Not Available | Positive | 639907 - 641196 | 48530.8 |
| histidine kinase family protein | M099_0595 | Not Available | Positive | 641337 - 642365 | 39021.8 |
| response regulator | M099_0596 | Not Available | Positive | 642358 - 643131 | 29809.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

