Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like domain protein | M099_0577 | Not Available | Positive | 619243 - 619755 | 19740.4 |
| 3-deoxy-8-phosphooctulonate synthase | M099_0578 | Not Available | Negative | 619916 - 620713 | 28835.3 |
| lipid kinase, yegs/rv2252/bmru family protein | M099_0579 | Not Available | Negative | 620786 - 621715 | 35331.0 |
| trna dimethylallyltransferase | M099_0580 | Not Available | Negative | 621721 - 622644 | 35776.3 |
| glyceraldehyde-3-phosphate dehydrogenase, type i | M099_0581 | Not Available | Negative | 622766 - 623776 | 35961.1 |
| large conductance mechanosensitive channel protein | M099_0582 | Not Available | Positive | 623946 - 624368 | 15113.9 |
| gmp synthase (glutamine-hydrolyzing) | M099_0583 | Not Available | Positive | 624609 - 626162 | 57645.2 |
| gmp synthase (glutamine-hydrolyzing) family protein | M099_0584 | Not Available | Positive | 626201 - 627508 | 48297.4 |
| metallopeptidase m24 family protein | M099_0585 | Not Available | Negative | 627665 - 628777 | 40330.1 |
| hypothetical protein | M099_0586 | Not Available | Positive | 629011 - 629364 | 13345.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

