Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 605118 - 605194 | Not Available |
| hypothetical protein | M099_0568 | Not Available | Negative | 607028 - 607156 | 4820.94 |
| abc-2 type transporter family protein | M099_0569 | Not Available | Negative | 608586 - 609725 | 42538.4 |
| abc-2 transporter family protein | M099_0570 | Not Available | Negative | 609760 - 610932 | 43620.6 |
| efflux transporter, rnd family, mfp subunit | M099_0571 | Not Available | Negative | 610993 - 611988 | 36927.8 |
| outer membrane efflux family protein | M099_0572 | Not Available | Negative | 612006 - 613439 | 53908.0 |
| hypothetical protein | M099_0573 | Not Available | Negative | 613502 - 615700 | 86181.9 |
| glutamine synthetase, catalytic domain protein | M099_0574 | Not Available | Positive | 615876 - 618065 | 82847.0 |
| cyclic nucleotide-binding domain protein | M099_0575 | Not Available | Positive | 618227 - 618928 | 26605.4 |
| hypothetical protein | M099_0576 | Not Available | Positive | 619058 - 619210 | 5511.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

