Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 577320 - 577396 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 577423 - 577499 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 577526 - 577602 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 577629 - 577705 | Not Available |
| putative esterase of the alpha-beta hydrolase superfamily domain protein | M099_0538 | Not Available | Negative | 577795 - 578157 | 13705.0 |
| transposase is66 family protein | M099_0539 | Not Available | Negative | 578196 - 579604 | 54582.8 |
| putative transposase | M099_0540 | Not Available | Negative | 579677 - 580012 | 13381.5 |
| hypothetical protein | M099_0541 | Not Available | Positive | 580180 - 580377 | 7710.61 |
| hypothetical protein | M099_0542 | Not Available | Negative | 580640 - 580846 | 6585.97 |
| tpr repeat family protein | M099_0543 | Not Available | Negative | 580893 - 581870 | 37183.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

