Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0514 | Not Available | Positive | 563233 - 563601 | 14287.3 |
| hypothetical protein | M099_0515 | Not Available | Positive | 563661 - 564428 | 30565.5 |
| hypothetical protein | M099_0516 | Not Available | Positive | 564421 - 564609 | 7305.84 |
| hypothetical protein | M099_0517 | Not Available | Positive | 564634 - 565224 | 22472.8 |
| putative transmembrane protein | M099_0518 | Not Available | Negative | 565636 - 566031 | 15634.9 |
| hypothetical protein | M099_0519 | Not Available | Negative | 566036 - 566317 | 11120.8 |
| type iv secretory system conjugative dna transfer family protein | M099_0520 | Not Available | Negative | 566472 - 568433 | 74755.1 |
| relaxase/mobilization nuclease domain protein | M099_0521 | Not Available | Negative | 568519 - 569664 | 43055.1 |
| hypothetical protein | M099_0522 | Not Available | Negative | 569658 - 569912 | 9745.71 |
| phage integrase family protein | M099_0523 | Not Available | Positive | 570865 - 571983 | 43728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

