Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel domain protein | M099_0484 | Not Available | Negative | 534578 - 535672 | 39303.2 |
| hypothetical protein | M099_0485 | Not Available | Negative | 535716 - 536564 | 30501.5 |
| hypothetical protein | M099_0486 | Not Available | Negative | 536575 - 537675 | 42610.1 |
| hypothetical protein | M099_0487 | Not Available | Positive | 538065 - 538439 | 14200.4 |
| peptide deformylase | M099_0488 | Not Available | Positive | 538463 - 539017 | 21050.7 |
| tpr repeat family protein | M099_0489 | Not Available | Positive | 539090 - 541099 | 77264.3 |
| threonine--trna ligase | M099_0490 | Not Available | Positive | 541180 - 543120 | 74203.1 |
| translation initiation factor if-3 | M099_0491 | Not Available | Positive | 543236 - 543832 | 22643.4 |
| hypothetical protein | M099_0492 | Not Available | Negative | 543865 - 543996 | 5163.27 |
| ribosomal protein l20 | M099_0493 | Not Available | Positive | 544213 - 544563 | 13181.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

