Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface antigen family protein | M099_0474 | Not Available | Positive | 522793 - 523893 | 42071.9 |
| sulfatase family protein | M099_0475 | Not Available | Positive | 523880 - 525586 | 64929.2 |
| mfs transporter, sugar porter family protein | M099_0476 | Not Available | Positive | 525700 - 527076 | 50159.4 |
| hypothetical protein | M099_0477 | Not Available | Positive | 528107 - 528229 | 4765.92 |
| wd40-like beta propeller repeat family protein | M099_0478 | Not Available | Negative | 528262 - 531522 | 123024.0 |
| hypothetical protein | M099_0479 | Not Available | Negative | 531552 - 531818 | 10057.5 |
| hypothetical protein | M099_0480 | Not Available | Negative | 531821 - 532177 | 13343.2 |
| ytxh-like family protein | M099_0481 | Not Available | Negative | 532255 - 532452 | 6773.24 |
| sporulation related domain protein | M099_0482 | Not Available | Positive | 532663 - 533160 | 17961.2 |
| glycoside hydrolase xylanase family protein | M099_0483 | Not Available | Positive | 533286 - 534245 | 35416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

