Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam peptide maturase, gg-bacteroidales family | M099_0027 | Not Available | Positive | 25934 - 27406 | 57391.3 |
| hypothetical protein | M099_0028 | Not Available | Positive | 27409 - 28677 | 49865.5 |
| hypothetical protein | M099_0029 | Not Available | Negative | 28929 - 29126 | 7710.61 |
| putative transposase | M099_0030 | Not Available | Positive | 29294 - 29629 | 13381.5 |
| transposase is66 family protein | M099_0031 | Not Available | Positive | 29702 - 31495 | 69306.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 31306 - 31413 | Not Available |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase family protein | M099_0032 | Not Available | Negative | 31578 - 32921 | 51232.2 |
| hypothetical protein | M099_0033 | Not Available | Positive | 33045 - 33167 | 4694.45 |
| hypothetical protein | M099_0034 | Not Available | Positive | 33320 - 33538 | 7684.12 |
| radical sam additional 4fe4s-binding spasm domain protein | M099_0035 | Not Available | Positive | 33631 - 34929 | 50845.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

