Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | M099_0464 | Not Available | Positive | 512099 - 512233 | 5281.48 |
| hypothetical protein | M099_0465 | Not Available | Positive | 512253 - 512474 | 8886.92 |
| hypothetical protein | M099_0466 | Not Available | Positive | 512487 - 513053 | 20327.0 |
| hypothetical protein | M099_0467 | Not Available | Positive | 513064 - 513462 | 14987.3 |
| prolyl oligopeptidase family protein | M099_0468 | Not Available | Positive | 513551 - 516001 | 91372.3 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_0469 | Not Available | Negative | 516135 - 516722 | 22401.4 |
| hypothetical protein | M099_0470 | Not Available | Positive | 516756 - 516905 | 5817.95 |
| efflux transporter, rnd family, mfp subunit | M099_0471 | Not Available | Positive | 517144 - 518199 | 38693.3 |
| export membrane family protein | M099_0472 | Not Available | Positive | 518218 - 521265 | 112618.0 |
| outer membrane efflux family protein | M099_0473 | Not Available | Positive | 521334 - 522557 | 45945.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

