Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | M099_0454 | Not Available | Negative | 502777 - 503466 | 26233.9 |
| l-asparaginase, type i family protein | M099_0455 | Not Available | Negative | 503663 - 504706 | 38700.6 |
| tryptophan synthase, alpha subunit | M099_0456 | Not Available | Negative | 504984 - 505760 | 28989.2 |
| n-(5'phosphoribosyl)anthranilate (pra) isomerase family protein | M099_0457 | Not Available | Negative | 505757 - 506374 | 22880.5 |
| indole-3-glycerol phosphate synthase family protein | M099_0458 | Not Available | Negative | 506387 - 507175 | 29293.4 |
| anthranilate phosphoribosyltransferase | M099_0459 | Not Available | Negative | 507214 - 508209 | 36466.1 |
| glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein | M099_0460 | Not Available | Negative | 508231 - 508821 | 21601.0 |
| chorismate binding enzyme family protein | M099_0461 | Not Available | Negative | 508834 - 510234 | 52830.4 |
| tryptophan synthase, beta subunit | M099_0462 | Not Available | Negative | 510295 - 511494 | 43957.0 |
| ytxh-like family protein | M099_0463 | Not Available | Negative | 511745 - 512005 | 9298.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

