Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | M099_0444 | Not Available | Positive | 493146 - 493688 | 20293.0 |
| n-acetylmuramoyl-l-alanine amidase family protein | M099_0445 | Not Available | Positive | 493695 - 494501 | 30760.1 |
| ribonuclease, rne/rng family domain protein | M099_0446 | Not Available | Negative | 494673 - 496247 | 59703.8 |
| bacterial dna-binding family protein | M099_0447 | Not Available | Negative | 496486 - 496761 | 10172.4 |
| a/g-specific adenine glycosylase | M099_0448 | Not Available | Positive | 496941 - 497999 | 40541.6 |
| single-stranded dna-binding family protein | M099_0449 | Not Available | Positive | 498014 - 498481 | 17289.3 |
| cbs domain protein | M099_0450 | Not Available | Positive | 498518 - 499870 | 50843.5 |
| 4'-phosphopantetheinyl transferase superfamily protein | M099_0451 | Not Available | Positive | 499879 - 500505 | 24514.3 |
| hypothetical protein | M099_0452 | Not Available | Positive | 500685 - 500897 | 8090.59 |
| his kinase a domain protein | M099_0453 | Not Available | Negative | 500977 - 502758 | 68710.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

