Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4677 | Not Available | Positive | 4963358 - 4963480 | 4663.83 |
| hypothetical protein | M099_4678 | Not Available | Negative | 4963741 - 4965321 | 61227.0 |
| ribosome recycling factor | M099_4679 | Not Available | Positive | 4965560 - 4966120 | 20738.2 |
| hypothetical protein | M099_4680 | Not Available | Negative | 4966085 - 4966225 | 5356.51 |
| ribosome small subunit-dependent gtpase a | M099_4681 | Not Available | Positive | 4966241 - 4967173 | 35098.8 |
| peptidase m20/m25/m40 family protein | M099_4682 | Not Available | Positive | 4967187 - 4968206 | 38293.7 |
| efflux transporter, rnd family, mfp subunit | M099_4683 | Not Available | Positive | 4968293 - 4969369 | 39686.0 |
| mmpl family protein | M099_4684 | Not Available | Positive | 4969389 - 4972424 | 111996.0 |
| outer membrane efflux family protein | M099_4685 | Not Available | Positive | 4972421 - 4973740 | 50562.7 |
| amino acid permease family protein | M099_4686 | Not Available | Positive | 4973829 - 4975487 | 59786.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

