Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | M099_4657 | Not Available | Positive | 4941402 - 4941617 | 8124.18 |
| plasmid pria4b orf-3-like family protein | M099_4658 | Not Available | Negative | 4941732 - 4943291 | 61139.4 |
| hypothetical protein | M099_4659 | Not Available | Negative | 4943472 - 4943801 | 12690.5 |
| thioredoxin | M099_4660 | Not Available | Negative | 4943843 - 4944157 | 11454.8 |
| dna polymerase iii, alpha subunit | M099_4661 | Not Available | Negative | 4944199 - 4947996 | 143977.0 |
| phosphatidylserine decarboxylase family protein | M099_4662 | Not Available | Positive | 4948188 - 4948874 | 25956.1 |
| cdp-alcohol phosphatidyltransferase family protein | M099_4663 | Not Available | Positive | 4948886 - 4949593 | 26073.4 |
| hypothetical protein | M099_4664 | Not Available | Positive | 4949646 - 4949948 | 11555.5 |
| cytidine and deoxycytidylate deaminase zinc-binding region family protein | M099_4665 | Not Available | Negative | 4949952 - 4950386 | 15697.1 |
| hypothetical protein | M099_4666 | Not Available | Negative | 4950388 - 4950663 | 11043.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

