Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impb/mucb/samb family protein | M099_4647 | Not Available | Positive | 4932867 - 4933304 | 16047.3 |
| transposase, mutator family protein | M099_4648 | Not Available | Positive | 4933386 - 4934618 | 46997.8 |
| impb/mucb/samb family protein | M099_4649 | Not Available | Positive | 4934662 - 4935309 | 24689.7 |
| adp-ribosylglycohydrolase family protein | M099_4650 | Not Available | Negative | 4935290 - 4936078 | 29815.7 |
| phosphoglycerate mutase 1 family protein | M099_4651 | Not Available | Positive | 4936242 - 4937003 | 29056.7 |
| fructose-bisphosphate aldolase class 1 | M099_4652 | Not Available | Positive | 4937155 - 4938207 | 38036.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | M099_4653 | Not Available | Positive | 4938369 - 4939595 | 45902.5 |
| putative phospholipase a2 | M099_4654 | Not Available | Positive | 4939600 - 4940019 | 15918.1 |
| feccd transport family protein | M099_4655 | Not Available | Positive | 4940071 - 4940922 | 31196.3 |
| trna threonylcarbamoyl adenosine modification protein yjee | M099_4656 | Not Available | Positive | 4940912 - 4941334 | 15952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

