Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4617 | Not Available | Negative | 4908024 - 4908527 | 19161.0 |
| conjugative transposon tran protein | M099_4618 | Not Available | Negative | 4908540 - 4909379 | 32374.3 |
| conjugative transposon tram protein | M099_4619 | Not Available | Negative | 4909381 - 4910490 | 41767.9 |
| hypothetical protein | M099_4620 | Not Available | Negative | 4910494 - 4910691 | 7651.3 |
| conjugative transposon trak protein | M099_4621 | Not Available | Negative | 4910925 - 4911539 | 23412.7 |
| putative membrane protein | M099_4622 | Not Available | Negative | 4911572 - 4912594 | 37649.7 |
| hypothetical protein | M099_4623 | Not Available | Negative | 4912587 - 4913243 | 25934.3 |
| putative plasmid transfer protein | M099_4624 | Not Available | Negative | 4913245 - 4913919 | 25473.4 |
| conjugation system atpase, trag family protein | M099_4625 | Not Available | Negative | 4913930 - 4916770 | 110318.0 |
| hypothetical protein | M099_4626 | Not Available | Negative | 4916776 - 4917075 | 11122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

