Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0434 | Not Available | Positive | 479013 - 479126 | 4219.24 |
| fecr family protein | M099_0435 | Not Available | Positive | 479266 - 480348 | 41129.2 |
| tonb-linked outer membrane, susc/raga family protein | M099_0436 | Not Available | Positive | 480526 - 484233 | 138409.0 |
| putative outer membrane protein | M099_0437 | Not Available | Positive | 484249 - 485838 | 60787.8 |
| hypothetical protein | M099_0438 | Not Available | Positive | 485860 - 487095 | 46945.4 |
| putative beta-phosphoglucomutase | M099_0439 | Not Available | Negative | 487208 - 487942 | 27115.4 |
| phosphoglucose isomerase family protein | M099_0440 | Not Available | Negative | 488092 - 489435 | 49078.8 |
| nad-dependent glycerol-3-phosphate dehydrogenase family protein | M099_0441 | Not Available | Negative | 489449 - 490444 | 37117.2 |
| lysine--trna ligase | M099_0442 | Not Available | Negative | 490501 - 492165 | 63883.1 |
| putative membrane protein | M099_0443 | Not Available | Negative | 492306 - 492914 | 23097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

