Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase family protein | M099_4578 | Not Available | Negative | 4863103 - 4864392 | 50523.9 |
| phage integrase family protein | M099_4579 | Not Available | Negative | 4864424 - 4865647 | 46020.4 |
| hypothetical protein | M099_4580 | Not Available | Negative | 4865851 - 4865985 | 5157.33 |
| his kinase a domain protein | M099_4581 | Not Available | Positive | 4866113 - 4867963 | 71114.3 |
| endonuclease/exonuclease/phosphatase family protein | M099_4582 | Not Available | Positive | 4867967 - 4869028 | 40748.7 |
| response regulator | M099_4583 | Not Available | Negative | 4869033 - 4870172 | 42228.6 |
| polysaccharide biosynthesis family protein | M099_4584 | Not Available | Negative | 4870182 - 4871120 | 35474.6 |
| phosphomethylpyrimidine kinase | M099_4585 | Not Available | Positive | 4871241 - 4872065 | 29140.4 |
| malonyl coa-acyl carrier protein transacylase | M099_4586 | Not Available | Positive | 4872192 - 4873079 | 31271.7 |
| patatin-like phospholipase family protein | M099_4587 | Not Available | Positive | 4873205 - 4873990 | 29317.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

