Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4568 | Not Available | Negative | 4857119 - 4857322 | 7733.45 |
| hypothetical protein | M099_4569 | Not Available | Negative | 4857306 - 4857485 | 6872.11 |
| hypothetical protein | M099_4570 | Not Available | Negative | 4857490 - 4857756 | 10279.1 |
| putative molybdenum import atp-binding protein modc | M099_4571 | Not Available | Negative | 4858162 - 4858488 | 12703.3 |
| pcfj-like family protein | M099_4572 | Not Available | Negative | 4858529 - 4859779 | 48014.1 |
| pcfk-like family protein | M099_4573 | Not Available | Negative | 4859815 - 4860270 | 17261.5 |
| hypothetical protein | M099_4574 | Not Available | Negative | 4860271 - 4861263 | 37044.8 |
| merr hth regulatory family protein | M099_4575 | Not Available | Positive | 4862071 - 4862364 | 11145.5 |
| helix-turn-helix domain protein | M099_4576 | Not Available | Positive | 4862361 - 4862672 | 12181.8 |
| putative non-receptor tyrosine-protein kinase tnk1 | M099_4577 | Not Available | Negative | 4862709 - 4863068 | 13645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

