Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4558 | Not Available | Negative | 4850303 - 4850503 | 7488.97 |
| hypothetical protein | M099_4559 | Not Available | Negative | 4850541 - 4850912 | 14419.2 |
| hypothetical protein | M099_4560 | Not Available | Positive | 4851497 - 4851619 | 4672.02 |
| fic/doc family protein | M099_4561 | Not Available | Positive | 4851905 - 4852750 | 32992.6 |
| hypothetical protein | M099_4562 | Not Available | Positive | 4852843 - 4853169 | 12003.7 |
| hypothetical protein | M099_4563 | Not Available | Negative | 4853473 - 4853593 | 4232.86 |
| conjugative transposon trao family protein | M099_4564 | Not Available | Positive | 4853594 - 4853840 | 9064.85 |
| conserved protein found in conjugate transposon | M099_4565 | Not Available | Positive | 4853863 - 4854297 | 16485.4 |
| hypothetical protein | M099_4566 | Not Available | Positive | 4854361 - 4856313 | 74107.6 |
| hypothetical protein | M099_4567 | Not Available | Positive | 4856771 - 4856983 | 7876.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

