Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4548 | Not Available | Negative | 4845786 - 4846020 | 8897.79 |
| transposase, mutator family protein | M099_4549 | Not Available | Positive | 4846021 - 4846373 | 13730.4 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_4550 | Not Available | Negative | 4846434 - 4846706 | 10409.6 |
| phage integrase family protein | M099_4551 | Not Available | Negative | 4847741 - 4848420 | 26387.7 |
| hypothetical protein | M099_4552 | Not Available | Negative | 4848421 - 4848944 | 20162.2 |
| Trna-thr | Not Available | Not Available | Positive | 4848976 - 4849050 | Not Available |
| hypothetical protein | M099_4554 | Not Available | Negative | 4849310 - 4849573 | 9725.32 |
| hypothetical protein | M099_4555 | Not Available | Negative | 4849593 - 4849796 | 7680.17 |
| hypothetical protein | M099_4556 | Not Available | Negative | 4849807 - 4850022 | 8494.11 |
| hypothetical protein | M099_4557 | Not Available | Negative | 4850079 - 4850291 | 7920.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

