Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase | M099_4538 | Not Available | Positive | 4833405 - 4834214 | 30250.0 |
| citrate transporter family protein | M099_4539 | Not Available | Positive | 4834227 - 4835783 | 56744.8 |
| adenylylsulfate kinase | M099_4540 | Not Available | Positive | 4835813 - 4836427 | 22681.6 |
| sulfate adenylyltransferase, small subunit | M099_4541 | Not Available | Positive | 4836439 - 4837350 | 35794.7 |
| sulfate adenylyltransferase, large subunit | M099_4542 | Not Available | Positive | 4837387 - 4838844 | 54506.5 |
| sulfotransferase domain protein | M099_4543 | Not Available | Positive | 4838872 - 4839978 | 43290.1 |
| ompa family protein | M099_4544 | Not Available | Negative | 4840056 - 4841255 | 43736.0 |
| hypothetical protein | M099_4545 | Not Available | Negative | 4841362 - 4842129 | 29408.4 |
| ahpc/tsa family protein | M099_4546 | Not Available | Positive | 4842223 - 4842717 | 18864.0 |
| cna b-type domain protein | M099_4547 | Not Available | Positive | 4842756 - 4845542 | 105872.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

