Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | M099_4528 | Not Available | Positive | 4822608 - 4822793 | 6539.02 |
| inosine-5'-monophosphate dehydrogenase | M099_4529 | Not Available | Positive | 4822982 - 4824457 | 52760.1 |
| ppic-type ppiase domain protein | M099_4530 | Not Available | Positive | 4824467 - 4825807 | 52337.5 |
| hypothetical protein | M099_4531 | Not Available | Positive | 4825844 - 4826716 | 34104.5 |
| ppic-type ppiase domain protein | M099_4532 | Not Available | Positive | 4826721 - 4828079 | 52289.8 |
| osta-like family protein | M099_4533 | Not Available | Positive | 4828097 - 4829764 | 63852.4 |
| hypothetical protein | M099_4534 | Not Available | Positive | 4829767 - 4830063 | 11737.6 |
| dna mismatch repair mutl family protein | M099_4535 | Not Available | Positive | 4830085 - 4831953 | 68716.8 |
| hypothetical protein | M099_4536 | Not Available | Positive | 4832020 - 4832136 | 4533.77 |
| surface antigen family protein | M099_4537 | Not Available | Positive | 4832182 - 4833390 | 45833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

