Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugation system atpase, trag family protein | M099_4508 | Not Available | Negative | 4802965 - 4805670 | 104065.0 |
| hypothetical protein | M099_4509 | Not Available | Negative | 4805774 - 4806070 | 10709.5 |
| hypothetical protein | M099_4510 | Not Available | Negative | 4806083 - 4806448 | 12980.6 |
| hypothetical protein | M099_4511 | Not Available | Negative | 4806853 - 4807299 | 16579.6 |
| toprim-like family protein | M099_4512 | Not Available | Negative | 4807540 - 4808427 | 34070.6 |
| aaa domain protein | M099_4513 | Not Available | Negative | 4808509 - 4809633 | 42310.5 |
| dna binding, excisionase family domain protein | M099_4514 | Not Available | Negative | 4809611 - 4809985 | 14535.7 |
| hypothetical protein | M099_4515 | Not Available | Negative | 4810184 - 4810828 | 24187.1 |
| phage integrase family protein | M099_4516 | Not Available | Negative | 4811087 - 4812217 | 43315.8 |
| hypothetical protein | M099_4517 | Not Available | Negative | 4812494 - 4812652 | 5914.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

