Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4488 | Not Available | Positive | 4781984 - 4782688 | 25739.6 |
| hypothetical protein | M099_4489 | Not Available | Positive | 4782882 - 4783232 | 13346.5 |
| relaxase/mobilization nuclease domain protein | M099_4490 | Not Available | Positive | 4783232 - 4784281 | 39514.8 |
| hypothetical protein | M099_4491 | Not Available | Positive | 4784278 - 4785066 | 30086.0 |
| phage integrase family protein | M099_4492 | Not Available | Positive | 4785072 - 4786283 | 46375.7 |
| putative type ii dna modification methyltransferase | M099_4493 | Not Available | Positive | 4786535 - 4787551 | 39548.8 |
| type iii restriction enzyme, res subunit | M099_4494 | Not Available | Positive | 4787558 - 4791547 | 151912.0 |
| hypothetical protein | M099_4495 | Not Available | Negative | 4791590 - 4791763 | 6442.58 |
| hypothetical protein | M099_4496 | Not Available | Negative | 4791872 - 4792483 | 23512.4 |
| sir2-like domain protein | M099_4497 | Not Available | Negative | 4792486 - 4793901 | 53994.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

