Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4468 | Not Available | Positive | 4766775 - 4766972 | 7523.86 |
| hypothetical protein | M099_4469 | Not Available | Positive | 4766984 - 4767256 | 10725.8 |
| hypothetical protein | M099_4470 | Not Available | Positive | 4767267 - 4767539 | 10324.8 |
| hypothetical protein | M099_4471 | Not Available | Positive | 4767580 - 4767957 | 14282.3 |
| hypothetical protein | M099_4472 | Not Available | Negative | 4768173 - 4769081 | 34519.4 |
| hypothetical protein | M099_4473 | Not Available | Negative | 4769074 - 4769838 | 29518.0 |
| type iv secretory system conjugative dna transfer family protein | M099_4474 | Not Available | Negative | 4770067 - 4772253 | 83124.3 |
| hypothetical protein | M099_4475 | Not Available | Negative | 4772261 - 4772743 | 18781.3 |
| hypothetical protein | M099_4476 | Not Available | Negative | 4772754 - 4773425 | 24360.6 |
| hypothetical protein | M099_4477 | Not Available | Negative | 4773433 - 4773945 | 19089.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

