Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4438 | Not Available | Positive | 4741594 - 4741731 | 5065.0 |
| hypothetical protein | M099_4439 | Not Available | Positive | 4741902 - 4742234 | 12768.5 |
| helix-turn-helix family protein | M099_4440 | Not Available | Positive | 4742231 - 4742593 | 13864.8 |
| hypothetical protein | M099_4441 | Not Available | Negative | 4742673 - 4744349 | 64297.9 |
| hypothetical protein | M099_4442 | Not Available | Negative | 4744355 - 4744912 | 21410.4 |
| mannosyl-glycoendo-beta-n-acetylglucosaminidase family protein | M099_4443 | Not Available | Negative | 4745231 - 4746778 | 56713.4 |
| muts domain i family protein | M099_4444 | Not Available | Negative | 4746783 - 4749122 | 89664.6 |
| hypothetical protein | M099_4445 | Not Available | Negative | 4749155 - 4750912 | 64867.8 |
| hypothetical protein | M099_4446 | Not Available | Negative | 4750976 - 4751131 | 6338.64 |
| peptidase m23 family protein | M099_4447 | Not Available | Negative | 4751284 - 4752114 | 31115.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

