Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4428 | Not Available | Positive | 4729964 - 4730092 | 4834.91 |
| hypothetical protein | M099_4429 | Not Available | Negative | 4730151 - 4730288 | 5340.05 |
| abc transporter family protein | M099_4430 | Not Available | Negative | 4730381 - 4731148 | 28529.0 |
| feccd transport family protein | M099_4431 | Not Available | Negative | 4731145 - 4732125 | 34200.6 |
| periplasmic binding family protein | M099_4432 | Not Available | Negative | 4732126 - 4733265 | 41272.8 |
| tonb dependent receptor family protein | M099_4433 | Not Available | Negative | 4733277 - 4735367 | 79049.5 |
| smp-30/gluconolaconase/lre-like region family protein | M099_4434 | Not Available | Negative | 4735382 - 4736386 | 38733.5 |
| glycoside hydrolase xylanase family protein | M099_4435 | Not Available | Negative | 4736511 - 4738601 | 76069.5 |
| fibronectin type-iii family protein | M099_4436 | Not Available | Negative | 4738631 - 4740412 | 66440.9 |
| hypothetical protein | M099_4437 | Not Available | Negative | 4740477 - 4741394 | 33860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

