Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4408 | Not Available | Positive | 4711246 - 4711413 | 5924.05 |
| hypothetical protein | M099_4409 | Not Available | Positive | 4711457 - 4711627 | 5763.98 |
| hypothetical protein | M099_4410 | Not Available | Positive | 4711716 - 4712012 | 11995.8 |
| bacterial dna-binding family protein | M099_4411 | Not Available | Negative | 4712195 - 4712476 | 10167.5 |
| hypothetical protein | M099_4412 | Not Available | Negative | 4712551 - 4712697 | 5469.85 |
| resolvase, n terminal domain protein | M099_4413 | Not Available | Negative | 4712914 - 4713546 | 23869.9 |
| hypothetical protein | M099_4414 | Not Available | Positive | 4713782 - 4714831 | 39667.8 |
| hypothetical protein | M099_4415 | Not Available | Positive | 4714858 - 4715310 | 17365.0 |
| hypothetical protein | M099_4416 | Not Available | Positive | 4715716 - 4716294 | 22185.4 |
| iclr helix-turn-helix domain protein | M099_4417 | Not Available | Positive | 4716297 - 4717139 | 31361.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

