Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4398 | Not Available | Negative | 4703895 - 4704041 | 5497.74 |
| single-strand binding family protein | M099_4399 | Not Available | Positive | 4704324 - 4704707 | 14395.2 |
| short chain dehydrogenase family protein | M099_4400 | Not Available | Negative | 4704800 - 4705591 | 29575.7 |
| hypothetical protein | M099_4401 | Not Available | Negative | 4705644 - 4706162 | 18938.7 |
| ribd c-terminal domain protein | M099_4402 | Not Available | Negative | 4706183 - 4706932 | 27646.0 |
| bacterial transferase hexapeptide family protein | M099_4403 | Not Available | Negative | 4706945 - 4707490 | 19764.0 |
| istb-like atp binding family protein | M099_4404 | Not Available | Negative | 4707680 - 4708204 | 19781.3 |
| hypothetical protein | M099_4405 | Not Available | Positive | 4708194 - 4708406 | 7643.09 |
| homeo-like domain protein | M099_4406 | Not Available | Negative | 4708447 - 4710045 | 61544.2 |
| hypothetical protein | M099_4407 | Not Available | Positive | 4710510 - 4711037 | 20688.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

