Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4378 | Not Available | Positive | 4696509 - 4696690 | 6716.27 |
| hypothetical protein | M099_4379 | Not Available | Positive | 4696691 - 4696837 | 5692.07 |
| hypothetical protein | M099_4380 | Not Available | Positive | 4696910 - 4697046 | 5354.31 |
| putative 4fe-4s binding domain-containing protein | M099_4381 | Not Available | Negative | 4697047 - 4697653 | 22126.5 |
| hypothetical protein | M099_4382 | Not Available | Positive | 4697630 - 4697758 | 4970.24 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_4383 | Not Available | Positive | 4698552 - 4698728 | 6675.22 |
| istb-like atp binding family protein | M099_4384 | Not Available | Positive | 4698841 - 4699188 | 13309.4 |
| transposase, mutator family protein | M099_4385 | Not Available | Positive | 4699281 - 4699551 | 10080.0 |
| transposase is66 family protein | M099_4386 | Not Available | Positive | 4699571 - 4699942 | 14160.6 |
| hypothetical protein | M099_4387 | Not Available | Positive | 4700107 - 4700412 | 11923.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

