Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4346 | Not Available | Negative | 4668106 - 4668270 | 6222.65 |
| hypothetical protein | M099_4347 | Not Available | Positive | 4668457 - 4668585 | 5126.28 |
| adenylosuccinate synthase | M099_4348 | Not Available | Negative | 4668570 - 4669841 | 46836.8 |
| ferric uptake regulator family protein | M099_4349 | Not Available | Negative | 4669858 - 4670325 | 18305.9 |
| dna alkylation repair enzyme family protein | M099_4350 | Not Available | Negative | 4670380 - 4671048 | 25716.3 |
| peptidase m49 family protein | M099_4351 | Not Available | Negative | 4671057 - 4673069 | 76580.1 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_4352 | Not Available | Negative | 4673175 - 4673642 | 18149.8 |
| atp-dependent dna helicase recq | M099_4353 | Not Available | Positive | 4673974 - 4675791 | 69130.0 |
| transposase dde domain protein | M099_4354 | Not Available | Positive | 4675957 - 4677468 | 59191.7 |
| tetratricopeptide repeat family protein | M099_4355 | Not Available | Negative | 4677660 - 4678481 | 31215.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

