Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain protein | M099_4316 | Not Available | Positive | 4639892 - 4640692 | 31033.5 |
| von willebrand factor type a domain protein | M099_4317 | Not Available | Positive | 4640770 - 4641534 | 29030.9 |
| adp-ribosylglycohydrolase family protein | M099_4318 | Not Available | Positive | 4641545 - 4642864 | 49896.1 |
| hypothetical protein | M099_4319 | Not Available | Positive | 4642908 - 4643483 | 23217.9 |
| hypothetical protein | M099_4320 | Not Available | Negative | 4643554 - 4643769 | 7781.4 |
| bacterial dna-binding family protein | M099_4321 | Not Available | Positive | 4643972 - 4644256 | 10478.8 |
| hypothetical protein | M099_4322 | Not Available | Positive | 4644294 - 4644971 | 25338.5 |
| hypothetical protein | M099_4323 | Not Available | Positive | 4644974 - 4645162 | 7333.6 |
| hypothetical protein | M099_4324 | Not Available | Positive | 4645210 - 4645326 | 4313.94 |
| hypothetical protein | M099_4325 | Not Available | Positive | 4645319 - 4645450 | 5029.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

