Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4286 | Not Available | Negative | 4616977 - 4617345 | 13376.9 |
| hypothetical protein | M099_4287 | Not Available | Positive | 4617637 - 4617750 | 4270.18 |
| hypothetical protein | M099_4288 | Not Available | Negative | 4617921 - 4618928 | 39111.7 |
| hypothetical protein | M099_4289 | Not Available | Positive | 4618999 - 4619202 | 7429.92 |
| putative ribose phosphate pyrophosphokinase | M099_4290 | Not Available | Negative | 4619312 - 4619689 | 14207.5 |
| putative ribose phosphate pyrophosphokinase | M099_4291 | Not Available | Negative | 4619686 - 4619817 | 5350.45 |
| starch-binding associating with outer membrane family protein | M099_4292 | Not Available | Negative | 4620620 - 4622590 | 74216.0 |
| tonb-linked outer membrane, susc/raga family protein | M099_4293 | Not Available | Negative | 4622612 - 4626052 | 127648.0 |
| fecr family protein | M099_4294 | Not Available | Negative | 4626241 - 4627212 | 37198.0 |
| rna polymerase sigma-70 factor, expansion 1 family protein | M099_4295 | Not Available | Negative | 4627307 - 4627882 | 22465.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

